All NES units come with at least one standard controller - without it, you wouldn't be able to play any games!
Standard controllers can be used in both controller ports, or in a Four score accessory.
See also Controller Reading
Input ($4016 write)
7 bit 0 ---- ---- xxxx xxxS | +- Controller shift register strobe
While S (strobe) is high, the shift registers in the controllers are continuously reloaded from the button states, and reading $4016/$4017 will keep returning the current state of the first button (A). Once S goes low, this reloading will stop. Hence a 1/0 write sequence is required to get the button states, after which the buttons can be read back one at a time.
(Note that bits 2-0 of $4016/write are stored in internal latches in the 2A03/07.)
Output ($4016/$4017 read)
NES only, both $4016 and $4017: 7 bit 0 ---- ---- OOOx xxxD |||| |||| |||| |||+- Serial controller data |||+-+++-- Always 0 +++------- Open bus
Famicom $4016: 7 bit 0 ---- ---- OOOx xMFD |||| |||| |||| |||+- Player 1 serial controller data |||| ||+-- If connected to expansion port, player 3 serial controller data (0 otherwise) |||| |+--- Microphone in controller 2 on traditional Famicom, 0 on AV Famicom |||+-+---- Open bus on traditional Famicom, all 0s on AV Famicom +++------- Open bus
Famicom $4017: 7 bit 0 ---- ---- OOOx xxFD |||| |||| |||| |||+- Player 2 serial controller data |||| ||+-- If connected to expansion port, player 4 serial controller data (0 otherwise) |||+-+++-- Returns 0 unless something is plugged into the Famicom expansion port +++------- Open bus
The first 8 reads will indicate which buttons are pressed (1 if pressed, 0 if not pressed); all subsequent reads will return D=1 on an authentic controller but may return D=0 on third party controllers.
Button status for each controller is returned as an 8-bit report in the following order: A, B, Select, Start, Up, Down, Left, Right. On plug-in controllers (the NES and AV Famicom) and the first controller of the original Famicom, all buttons are present. But on the original Famicom's second controller, the Select and Start buttons are completely missing, and the encoder chip returns 0 instead: A, B, 0, 0, Up, Down, Left, Right. Because these buttons are missing, homebrew games for the Famicom MUST NOT require the second player to press Select or Start.
In the NES and Famicom, the top three (or five) bits are not driven, and so retain the bits of the previous byte on the bus. Usually this is the most significant byte of the address of the controller port—0x40. Paperboy relies on this behavior and requires that reads from the controller ports return exactly $40 or $41 as appropriate.
Because the Famicom controllers are permanently attached, some games, such as Simon's Quest, allow the use of the player 3 and 4 data for players 1 and 2.
A Super NES controller can be wired to the NES controller port, and it returns a 16-bit report in a similar order: B, Y, Select, Start, Up, Down, Left, Right, A, X, L, R, then four 0 bits.
The 4021 (or 74165) IC is an 8-bit parallel-to-serial shift register. It has a pin "serial input", ordinarily used to chain the output of one shift register into the next one as seen in the Four Score or the Super NES controller. The serial input on the tail end of such a chain (or the only one in the case of an NES) can be tied to ground or Vcc, which determines the state of the output after all bits have been shifted out. If this is grounded, the shift register produces a 0 after all bits have been shifted out; if it's tied to Vcc, it produces a 1.
In the NES controller, this input is grounded. But because the signals from the controllers pass through an inverter before reaching the CPU, the register produces a 1 for all reads after the first eight.
The CLK line for controller port is R/W nand (ADDRESS == $4016/$4017) (i.e., CLK is low only when reading $4016/$4017, since R/W high means read). When this transitions from high to low, the buffer inside the NES latches the output of the controller data lines, and when it transitions from low to high, the shift register in the controller shifts one bit.
This can cause glitches if the DMC DMA is running, and happens to start a read in the same cycle that the CPU is trying to read from $4016 or $4017. Since the address bus will change for one cycle, the shift register will see an extra rising clock edge (a "double clock"), and the shift register will drop a bit out. The program will see this as a bit deletion from the serial data, and games using DMC will reread the controller to make sure no bit deletion happened. See http://forums.nesdev.com/viewtopic.php?t=4116 for details and http://forums.nesdev.com/viewtopic.php?t=4124 for a reliable controller reading routine.
A turbo controller such as the NES Max or NES Advantage is read just like a standard controller, but the user can switch some of its buttons to be toggled by an oscillator. Such an oscillator turns the button on and off at 15 to 30 Hz, producing rapid fire in games. A controller MUST NOT toggle the button states on each strobe pulse; that'll break any game that rereads the controller.